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Extinction Coefficients

Measured and calculated extinction coefficients at 260 nm and neutral pH for single-stranded RNA (A260 units/µmol)

RNA e260 RNA e260
pA

15.4

CpG 8.9
pC 7.2 CpU 8.1
pG 11.5 GpA 12.6
pU 9.9 GpC

8.7

ApA 13.7 GpG 10.8
ApC 10.5 GpU 10.6
ApG 12.5 UpA 12.3
ApU 12.0 UpC 8.6
CpA 10.5 UpG 10.0
CpC 7.1 UpU 9.8

Approximate extinction coefficients (accuracy about 10%) for single-stranded RNA and 2´-O-methylRNA m residues long of sequence DpEpFpGp----KpL can be calculated from the nearest neighbour formula:

eDpEpFpGp-----KpL = 2(eDpE + eEpF + eFpG + ----- +eKpL) - (eE + eF + eG ---- + eK)